BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E06SP1|AL430243
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1675 1684 0.0
>3x_Contig1675
Length = 13954
Score = 1684 bits (848), Expect = 0.0
Identities = 863/866 (99%), Gaps = 2/866 (0%)
Strand = Plus / Plus
Query: 1 gatcaggtttggggwaggctctacgattgttgcaaataccacatgcatacatgcacaatg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gatcaggtttggggaaggctctacgattgttgcaaataccacatgcatacatgcacaatg 385
Query: 61 ccggaaacgacgcttactatacactgagacttc-tactacacatgtgcgatat-cgaaaa 118
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 386 ccggaaacgacgcttactatacactgagacttcctactacacatgtgcgatatgcgaaaa 445
Query: 119 gagaaagctgttagccttggatgacatcgaaaggatccaaaacattatcgaaggatggag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gagaaagctgttagccttggatgacatcgaaaggatccaaaacattatcgaaggatggag 505
Query: 179 gtcacatgactcaggaaattcatcaggtaaatccaaaagaagaaagaagctagtgtctac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gtcacatgactcaggaaattcatcaggtaaatccaaaagaagaaagaagctagtgtctac 565
Query: 239 cgaattccaaggagtagctccattcagctcgttgccttgaacatctaacattctttattg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cgaattccaaggagtagctccattcagctcgttgccttgaacatctaacattctttattg 625
Query: 299 tatgtagcggatattcactcacttctttaatacaaatctcaagagggtcgacatcaccaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tatgtagcggatattcactcacttctttaatacaaatctcaagagggtcgacatcaccaa 685
Query: 359 gatctaacaagtaatcttatttccgtacctacctcactgtgcgccctctgaaaattccgt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gatctaacaagtaatcttatttccgtacctacctcactgtgcgccctctgaaaattccgt 745
Query: 419 agctcttaattgcaaaacgcgtgattttaatttcaaacatatgcgaggtacacatgcagg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 agctcttaattgcaaaacgcgtgattttaatttcaaacatatgcgaggtacacatgcagg 805
Query: 479 acaatggatggtgccttctaaacctgcaccactagagattctgaaggaaatgcattctca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 acaatggatggtgccttctaaacctgcaccactagagattctgaaggaaatgcattctca 865
Query: 539 cagaaaatatcgcaatgcaacaattttgtttgttttttcactttttttcatgtttttttg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 cagaaaatatcgcaatgcaacaattttgtttgttttttcactttttttcatgtttttttg 925
Query: 599 ttaaccttttagtttttaccagcaattttcctgtaaccatgagaacggctaaactcacaa 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 ttaaccttttagtttttaccagcaattttcctgtaaccatgagaacggctaaactcacaa 985
Query: 659 acaaccaaaaaactttcagcatcatccaagtagtggatttccccttttctcctgtttcgc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 acaaccaaaaaactttcagcatcatccaagtagtggatttccccttttctcctgtttcgc 1045
Query: 719 gtctggatatataggaaatcgttcagaaccggaacgattaactgctggttatattggtag 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 gtctggatatataggaaatcgttcagaaccggaacgattaactgctggttatattggtag 1105
Query: 779 gaacggttagttccttcagcaaatcagcccatcttggaattaggatcaaggtagccacaa 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 gaacggttagttccttcagcaaatcagcccatcttggaattaggatcaaggtagccacaa 1165
Query: 839 gcaataataataataataataataat 864
||||||||||||||||||||||||||
Sbjct: 1166 gcaataataataataataataataat 1191
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8127
Number of Sequences: 1807
Number of extensions: 8127
Number of successful extensions: 469
Number of sequences better than 1.0e-20: 1
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)